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SKOR2 SKI family transcriptional corepressor 2 [ Myotis davidii ]

Gene ID: 102760724, updated on 30-Mar-2024

Summary

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Gene symbol
SKOR2
Gene description
SKI family transcriptional corepressor 2
Locus tag
MDA_GLEAN10007977
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See SKOR2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006288179.1 (789133..827449, complement)

NW_006288179.1Genomic Context describing neighboring genes Neighboring gene haloacid dehalogenase like hydrolase domain containing 2 Neighboring gene immediate early response 3 interacting protein 1 Neighboring gene uncharacterized LOC107182516 Neighboring gene SMAD family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006288179.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SKI family transcriptional corepressor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006288179.1 Reference ASM32734v1

    Range
    789133..827449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006759969.2 → XP_006760032.1  SKI family transcriptional corepressor 2

    Conserved Domains (2) summary
    pfam02437
    Location:39 → 132
    Ski_Sno; SKI/SNO/DAC family
    pfam08782
    Location:145 → 221
    c-SKI_SMAD_bind; c-SKI Smad4 binding domain
Nucleotide Protein
Heading Accession and Version

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