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Gm2956 predicted gene 2956 [ Mus musculus (house mouse) ]

Gene ID: 102640268, updated on 27-Nov-2024

Summary

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Official Symbol
Gm2956provided by MGI
Official Full Name
predicted gene 2956provided by MGI
Primary source
MGI:MGI:3781134
See related
Ensembl:ENSMUSG00000096574 AllianceGenome:MGI:3781134
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm36379; 100040767
Expression
Broad expression in CNS E18 (RPKM 3.2), CNS E14 (RPKM 1.9) and 20 other tissues See more
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Genomic context

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See Gm2956 in Genome Data Viewer
Location:
14 A2; 14 1.77 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (19114974..19137685, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (3332010..3354799)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted pseudogene 8348 Neighboring gene predicted gene 10413 Neighboring gene RIKEN cDNA 1700110I01 gene Neighboring gene predicted gene, 46491 Neighboring gene ribosomal protein L3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, et al. Nature, 2002 Dec 5. PMID 12466851

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
uncharacterized protein LOC102640268
Names
alpha19-takusan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001378650.1 → NP_001365579.1  uncharacterized protein LOC102640268

    Status: VALIDATED

    Source sequence(s)
    AC186757
    UniProtKB/TrEMBL
    A0AA74KT78, A6NAT4, A6NAT5
    Related
    ENSMUSP00000159732.1, ENSMUST00000249374.1
    Conserved Domains (1) summary
    pfam04822
    Location:1 → 73
    Takusan

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    19114974..19137685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158334.1 → XP_036014227.1  uncharacterized protein LOC102640268 isoform X1

    UniProtKB/TrEMBL
    A0AA74KSW7
    Conserved Domains (1) summary
    pfam04822
    Location:101 → 181
    Takusan

  2. XM_011244800.4 → XP_011243102.1  uncharacterized protein LOC102640268 isoform X6

  3. XM_006517864.5 → XP_006517927.1  uncharacterized protein LOC102640268 isoform X7

  4. XM_006517862.5 → XP_006517925.1  uncharacterized protein LOC102640268 isoform X4

  5. XM_011244801.4 → XP_011243103.1  uncharacterized protein LOC102640268 isoform X8

  6. XM_017316347.3 → XP_017171836.1  uncharacterized protein LOC102640268 isoform X9

  7. XM_036158335.1 → XP_036014228.1  uncharacterized protein LOC102640268 isoform X2

  8. XM_006517861.5 → XP_006517924.1  uncharacterized protein LOC102640268 isoform X3

  9. XM_006517863.5 → XP_006517926.1  uncharacterized protein LOC102640268 isoform X5

Nucleotide Protein Strain
Heading Accession and Version

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