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Gm36246 predicted gene, 36246 [ Mus musculus (house mouse) ]

Gene ID: 102640093, updated on 22-Oct-2024

Summary

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Official Symbol
Gm36246provided by MGI
Official Full Name
predicted gene, 36246provided by MGI
Primary source
MGI:MGI:5595405
See related
Ensembl:ENSMUSG00000116402 AllianceGenome:MGI:5595405
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 2.3) See more
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Genomic context

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See Gm36246 in Genome Data Viewer
Location:
15 F3; 15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (102259262..102263574)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (102350827..102355139)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E7422 Neighboring gene melanocyte proliferating gene 1 Neighboring gene STARR-seq mESC enhancer starr_39832 Neighboring gene achalasia, adrenocortical insufficiency, alacrimia Neighboring gene Sp7 transcription factor 7 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:102212079-102212188 Neighboring gene STARR-seq mESC enhancer starr_39837 Neighboring gene STARR-seq mESC enhancer starr_39838 Neighboring gene STARR-seq mESC enhancer starr_39839 Neighboring gene STARR-seq mESC enhancer starr_39841 Neighboring gene trans-acting transcription factor 1 Neighboring gene STARR-seq mESC enhancer starr_39842

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_155425.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CN839838
    Related
    ENSMUST00000256521.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    102259262..102263574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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