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Gm26871 predicted gene, 26871 [ Mus musculus (house mouse) ]

Gene ID: 102634933, updated on 17-Aug-2024

Summary

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Official Symbol
Gm26871provided by MGI
Official Full Name
predicted gene, 26871provided by MGI
Primary source
MGI:MGI:5477365
See related
AllianceGenome:MGI:5477365
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in CNS E18 (RPKM 3.0), whole brain E14.5 (RPKM 1.8) and 5 other tissues See more
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Genomic context

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See Gm26871 in Genome Data Viewer
Location:
3 G1; 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (118223583..118337636)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (118498307..118540533)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_08809 Neighboring gene STARR-seq mESC enhancer starr_08810 Neighboring gene sorting nexin 7 Neighboring gene predicted gene, 52614 Neighboring gene predicted gene, 32344 Neighboring gene STARR-seq mESC enhancer starr_08811 Neighboring gene STARR-seq mESC enhancer starr_08812 Neighboring gene STARR-seq mESC enhancer starr_08813 Neighboring gene STARR-seq mESC enhancer starr_08815 Neighboring gene microRNA 137 Neighboring gene predicted gene 9916 Neighboring gene STARR-seq mESC enhancer starr_08816 Neighboring gene dihydropyrimidine dehydrogenase Neighboring gene STARR-seq mESC enhancer starr_08817 Neighboring gene STARR-seq mESC enhancer starr_08818 Neighboring gene STARR-seq mESC enhancer starr_08819 Neighboring gene STARR-seq mESC enhancer starr_08820 Neighboring gene STARR-seq mESC enhancer starr_08821 Neighboring gene predicted gene, 32577

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    118223583..118337636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004941500.1 RNA Sequence

  2. XR_004941499.1 RNA Sequence

  3. XR_004941501.1 RNA Sequence

  4. XR_004941502.1 RNA Sequence

  5. XR_004941493.1 RNA Sequence

  6. XR_004941503.1 RNA Sequence

  7. XR_004941497.1 RNA Sequence

  8. XR_004941496.1 RNA Sequence

  9. XR_004941495.1 RNA Sequence

  10. XR_004941494.1 RNA Sequence

  11. XR_004941498.1 RNA Sequence

  12. XR_867578.3 RNA Sequence

  13. XR_003954546.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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