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Chrna1os cholinergic receptor nicotinic alpha 1 subunit, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 102633437, updated on 17-Aug-2024

Summary

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Official Symbol
Chrna1osprovided by MGI
Official Full Name
cholinergic receptor nicotinic alpha 1 subunit, opposite strandprovided by MGI
Primary source
MGI:MGI:3651120
See related
Ensembl:ENSMUSG00000086382 AllianceGenome:MGI:3651120
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm13705; Gm31264
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Chrna1os in Genome Data Viewer
Location:
2 43.77 cM; 2 C3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (73415204..73419552)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (73584860..73589208)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene WAS/WASL interacting protein family, member 1 Neighboring gene STARR-positive B cell enhancer mm9_chr2:73378889-73379190 Neighboring gene predicted gene, 54162 Neighboring gene STARR-positive B cell enhancer ABC_E10115 Neighboring gene predicted gene, 30940 Neighboring gene cholinergic receptor nicotinic alpha 1 subunit Neighboring gene predicted gene, 53265 Neighboring gene chimerin 1, opposite strand 3 Neighboring gene chimerin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
  2. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
  3. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), opposite strand

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_153820.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    KY467873
    Related
    ENSMUST00000147235.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    73415204..73419552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.