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Gm16118 predicted gene 16118 [ Mus musculus (house mouse) ]

Gene ID: 102632420, updated on 22-Oct-2024

Summary

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Official Symbol
Gm16118provided by MGI
Official Full Name
predicted gene 16118provided by MGI
Primary source
MGI:MGI:3801926
See related
Ensembl:ENSMUSG00000089797 AllianceGenome:MGI:3801926
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm16118 in Genome Data Viewer
Location:
8 E1; 8 61.42 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (115425179..115434847, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (114698439..114708107, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene WW domain-containing oxidoreductase Neighboring gene STARR-seq mESC enhancer starr_22775 Neighboring gene predicted gene, 30554 Neighboring gene STARR-seq mESC enhancer starr_22776 Neighboring gene predicted gene 16117 Neighboring gene STARR-seq mESC enhancer starr_22777 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:117339207-117339316 Neighboring gene predicted gene, 53457 Neighboring gene STARR-positive B cell enhancer ABC_E6688 Neighboring gene predicted gene, 39257

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    115425179..115434847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_879218.2 RNA Sequence

    Related
    ENSMUST00000161914.3

  2. XR_004935076.1 RNA Sequence

  3. XR_004935077.1 RNA Sequence

    Related
    ENSMUST00000284322.1

  4. XR_879217.2 RNA Sequence

  5. XR_004935075.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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