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LOC102577726 UDP-glucose pyrophosphorylase precursor [ Solanum tuberosum (potato) ]

Gene ID: 102577726, updated on 14-Nov-2024

Summary

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Gene symbol
LOC102577726
Gene description
UDP-glucose pyrophosphorylase precursor
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Also known as
UDPGP; UGPase
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Genomic context

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See LOC102577726 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239071.1 (808246..814804)

NW_006239071.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase COP1-like Neighboring gene probable tyrosine-protein phosphatase At1g05000 Neighboring gene isocitrate dehydrogenase [NADP]-like Neighboring gene glutamate decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239071.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and sequence variation of UDP-glucose pyrophosphorylase cDNAs from potatoes sensitive and resistant to cold sweetening. Sowokinos JR, et al. J Plant Physiol, 2004 Aug. PMID 15384406
  2. Organization and transcription of the gene encoding potato UDP-glucose pyrophosphorylase. Borovkov AY, et al. Gene, 1997 Feb 28. PMID 9074509
  3. UDP-glucose pyrophosphorylase from potato tuber: purification and characterization. Nakano K, et al. J Biochem, 1989 Sep. PMID 2558111
  4. UDP-glucose pyrophosphorylase from potato tuber: cDNA cloning and sequencing. Katsube T, et al. J Biochem, 1990 Aug. PMID 2229031
  5. Expression in Escherichia coli of UDP-glucose pyrophosphorylase cDNA from potato tuber and functional assessment of the five lysyl residues located at the substrate-binding site. Katsube T, et al. Biochemistry, 1991 Sep 3. PMID 1909568

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UTP:glucose-1-phosphate uridylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-alpha-D-glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UTP--glucose-1-phosphate uridylyltransferase
Names
UDP-glucose pyrophosphorylase-like protein
UTP:alpha-D-glucose-1-phosphate uridylyltransferase
NP_001274948.1
XP_006352386.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001288019.1 → NP_001274948.1  UTP--glucose-1-phosphate uridylyltransferase

    See identical proteins and their annotated locations for NP_001274948.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ191641
    UniProtKB/Swiss-Prot
    P19595, Q43192, Q5F1U8
    UniProtKB/TrEMBL
    Q3HVN2, Q5F1U6
    Conserved Domains (1) summary
    cl11394
    Location:10 → 471
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239071.1 Reference SolTub_3.0 Primary Assembly

    Range
    808246..814804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006352324.1 → XP_006352386.1  UTP--glucose-1-phosphate uridylyltransferase isoform X1

    UniProtKB/Swiss-Prot
    P19595, Q43192, Q5F1U8
    UniProtKB/TrEMBL
    M1B150, Q5F1U6
    Conserved Domains (1) summary
    PLN02474
    Location:10 → 477
    PLN02474; UTP--glucose-1-phosphate uridylyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P19595.3 GenPept UniProtKB/Swiss-Prot:P19595

Gene LinkOut

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