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LOC102557194 uncharacterized LOC102557194 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102557194, updated on 17-Aug-2024

Summary

Symbol
LOC102557194provided by RGD
Full Name
uncharacterized LOC102557194provided by RGD
Primary source
RGD:7688731
See related
EnsemblRapid:ENSRNOG00000082449 AllianceGenome:RGD:7688731
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Kidney (RPKM 1.2), Heart (RPKM 1.2) and 7 other tissues See more
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Genomic context

See LOC102557194 in Genome Data Viewer
Location:
2q34
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (197492086..197511615, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (194803019..194823691, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (209936714..209957443, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily A member 2 Neighboring gene uncharacterized LOC120100911 Neighboring gene potassium voltage-gated channel subfamily A member 10 Neighboring gene chymosin Neighboring gene prokineticin 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    197492086..197511615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_591277.4 RNA Sequence

    Related
    ENSRNOT00000147467.1