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LOC102549024 uncharacterized LOC102549024 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102549024, updated on 17-Aug-2024

Summary

Symbol
LOC102549024provided by RGD
Full Name
uncharacterized LOC102549024provided by RGD
Primary source
RGD:7517602
See related
EnsemblRapid:ENSRNOG00000076275 AllianceGenome:RGD:7517602
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC102549024 in Genome Data Viewer
Location:
4q44
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (177016974..177021696)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (175285952..175291175)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (176559536..176563834)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene solute carrier organic anion transporter family, member 1a6 Neighboring gene solute carrier organic anion transporter family, member 1A5 Neighboring gene islet amyloid polypeptide Neighboring gene pyridine nucleotide-disulphide oxidoreductase domain 1 Neighboring gene RecQ like helicase Neighboring gene golgi transport 1B

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    177016974..177021696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_353723.3 RNA Sequence

    Related
    ENSRNOT00000167181.1