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LOC102548772 uncharacterized LOC102548772 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102548772, updated on 17-Aug-2024

Summary

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Symbol
LOC102548772provided by RGD
Full Name
uncharacterized LOC102548772provided by RGD
Primary source
RGD:7567433
See related
AllianceGenome:RGD:7567433
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Kidney (RPKM 9.7), Heart (RPKM 9.3) and 9 other tissues See more
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Genomic context

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See LOC102548772 in Genome Data Viewer
Location:
14q22
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (99204243..99235282)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (95003278..95033943)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (105078450..105085243)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene aftiphilin Neighboring gene ribosomal protein S28, pseudogene 5 Neighboring gene uncharacterized LOC120096688 Neighboring gene galectin-like Neighboring gene ribosomal protein S12 like 10 Neighboring gene uncharacterized LOC120096689 Neighboring gene uncharacterized LOC102549056

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
probable splicing factor, arginine/serine-rich 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    99204243..99235282
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039092872.2 → XP_038948800.1  probable splicing factor, arginine/serine-rich 4

RNA

  1. XR_005493467.2 RNA Sequence

  2. XR_005493470.2 RNA Sequence

  3. XR_005493468.2 RNA Sequence

  4. XR_005493469.2 RNA Sequence

  5. XR_001841213.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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