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NSUN3 NOP2/Sun RNA methyltransferase 3 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102487165, updated on 10-Mar-2024

Summary

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Gene symbol
NSUN3
Gene description
NOP2/Sun RNA methyltransferase 3
Locus tag
TREES_T100012783
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See NSUN3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159439.1 (2250186..2304602)

NW_006159439.1Genomic Context describing neighboring genes Neighboring gene ARF like GTPase 13B Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene protein SET-like Neighboring gene up-regulated during skeletal muscle growth protein 5 pseudogene Neighboring gene proteasome activator complex subunit 2 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159439 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial
Names
NOP2/Sun RNA methyltransferase family member 3
Putative methyltransferase NSUN3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159439.1 Reference TupChi_1.0

    Range
    2250186..2304602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027766053.1 → XP_027621854.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

    UniProtKB/TrEMBL
    L9LDV3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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