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ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102245435, updated on 30-Mar-2024

Summary

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Gene symbol
ANKFN1
Gene description
ankyrin repeat and fibronectin type III domain containing 1
Locus tag
D623_10020703
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See ANKFN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005364711.1 (1242423..1693226, complement)

NW_005364711.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106727178 Neighboring gene chromosome unknown C17orf67 homolog Neighboring gene noggin Neighboring gene uncharacterized LOC106727179 Neighboring gene phosphatidylcholine transfer protein Neighboring gene transmembrane protein 100

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005364711.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment of mitotic spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of establishment of bipolar cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and fibronectin type-III domain-containing protein 1
Names
Ankyrin repeat and fibronectin type-III domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005364711.1 Reference ASM41265v1

    Range
    1242423..1693226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005872543.2 → XP_005872605.1  ankyrin repeat and fibronectin type-III domain-containing protein 1

    Conserved Domains (4) summary
    cd00063
    Location:365 → 457
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00204
    Location:226 → 292
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13637
    Location:231 → 288
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:231 → 265
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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