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LOC101929554 suppressyn-like [ Homo sapiens (human) ]

Gene ID: 101929554, updated on 10-Dec-2024

Summary

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Gene symbol
LOC101929554
Gene description
suppressyn-like
Gene type
pseudo
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC101929554 in Genome Data Viewer
Location:
12q21.32
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (88233290..88233894)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (88215249..88215853)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902977 Neighboring gene transmembrane protein 38A pseudogene Neighboring gene MPRA-validated peak1864 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6699 Neighboring gene centrosomal protein 290 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:88535951-88536454 Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 3 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:88621606-88622152 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:88637506-88638084 Neighboring gene MPRA-validated peak1868 silencer Neighboring gene MPRA-validated peak1869 silencer Neighboring gene uncharacterized LOC124902978 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6701 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6702 Neighboring gene MPRA-validated peak1870 silencer Neighboring gene Sharpr-MPRA regulatory region 14654 Neighboring gene KIT ligand Neighboring gene uncharacterized LOC124902979 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:88953161-88954360

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    88233290..88233894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    88215249..88215853
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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