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LINC00463 long intergenic non-protein coding RNA 463 [ Homo sapiens (human) ]

Gene ID: 101928922, updated on 22-Oct-2024

Summary

Official Symbol
LINC00463provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 463provided by HGNC
Primary source
HGNC:HGNC:42813
See related
Ensembl:ENSG00000234056 AllianceGenome:HGNC:42813
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AMER2-AS1
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00463 in Genome Data Viewer
Location:
13q12.13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (25172824..25180001, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (24382498..24389679, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (25746962..25754139, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900613 Neighboring gene uncharacterized LOC105370120 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:25710909-25711473 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:25711474-25712037 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5183 Neighboring gene APC membrane recruitment protein 2 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:25747285-25748484 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5184 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7481 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7482 Neighboring gene long intergenic non-protein coding RNA 1053 Neighboring gene ribosomal protein L23a pseudogene 69

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • AMER2 antisense RNA 1 (head to head)
  • TCONS_l2_00007499

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120428.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA719680, BU165513, BU182247
    Related
    ENST00000413501.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    25172824..25180001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    24382498..24389679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)