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LOC101928608 uncharacterized LOC101928608 [ Homo sapiens (human) ]

Gene ID: 101928608, updated on 10-Dec-2024

Summary

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Gene symbol
LOC101928608
Gene description
uncharacterized LOC101928608
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 3.1) See more
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Genomic context

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See LOC101928608 in Genome Data Viewer
Location:
9q21.11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (67832798..67855261)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (79615500..79636585)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900280 Neighboring gene RNA, 7SL, cytoplasmic 787, pseudogene Neighboring gene ankyrin repeat domain 20 family member A1 Neighboring gene RNA, U6 small nuclear 368, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:70837488-70837989 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70895397-70895980 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70895981-70896564 Neighboring gene uncharacterized LOC124902173 Neighboring gene Zn regulated GTPase metalloprotein activator 1C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    67832798..67855261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007061899.1 RNA Sequence

  2. XR_007061900.1 RNA Sequence

  3. XR_001746695.3 RNA Sequence

  4. XR_007061901.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    79615500..79636585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080540.1 RNA Sequence

  2. XR_007080539.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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