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ADGRB3-DT ADGRB3 divergent transcript [ Homo sapiens (human) ]

Gene ID: 101928307, updated on 10-Dec-2024

Summary

Official Symbol
ADGRB3-DTprovided by HGNC
Official Full Name
ADGRB3 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55774
See related
AllianceGenome:HGNC:55774
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in brain (RPKM 14.2), adrenal (RPKM 3.7) and 4 other tissues See more
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Genomic context

See ADGRB3-DT in Genome Data Viewer
Location:
6q12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (68632663..68634324, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (69810230..69811891, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (69342555..69344216, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377846 Neighboring gene long intergenic non-protein coding RNA 2549 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:69073362-69073543 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17313 Neighboring gene uncharacterized LOC127898563 Neighboring gene NANOG hESC enhancer GRCh37_chr6:69359553-69360054 Neighboring gene Sharpr-MPRA regulatory region 12523 Neighboring gene uncharacterized LOC124901511 Neighboring gene adhesion G protein-coupled receptor B3

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125872.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL833240, BM686538

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    68632663..68634324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    69810230..69811891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)