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LOC101927605 uncharacterized LOC101927605 [ Homo sapiens (human) ]

Gene ID: 101927605, updated on 10-Dec-2024

Summary

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Gene symbol
LOC101927605
Gene description
uncharacterized LOC101927605
See related
Ensembl:ENSG00000261436
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101927605 in Genome Data Viewer
Location:
16q21
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (60359782..60547255)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (66151359..66338857)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2141 Neighboring gene uncharacterized LOC105371299 Neighboring gene NOP58 ribonucleoprotein homolog (yeast) pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:60112162-60113065 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:60114633-60115134 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:60117794-60118510 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:60251661-60252265 Neighboring gene nuclear pore associated protein 1 like (pseudogene) Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:60493067-60493566 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:60572390-60572596 Neighboring gene glyceronephosphate O-acyltransferase pseudogene Neighboring gene uncharacterized LOC107984812

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    60359782..60547255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001752229.1 RNA Sequence

  2. XR_001752231.1 RNA Sequence

  3. XR_002957906.2 RNA Sequence

    Related
    ENST00000668278.1

  4. XR_007065084.1 RNA Sequence

    Related
    ENST00000661762.1

  5. XR_007065085.1 RNA Sequence

    Related
    ENST00000661803.2

  6. XR_001752230.1 RNA Sequence

  7. XR_007065083.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    66151359..66338857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007086516.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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