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LINC02587 long intergenic non-protein coding RNA 2587 [ Homo sapiens (human) ]

Gene ID: 101927524, updated on 10-Dec-2024

Summary

Official Symbol
LINC02587provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2587provided by HGNC
Primary source
HGNC:HGNC:50672
See related
Ensembl:ENSG00000229108 AllianceGenome:HGNC:50672
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MEOX2-AS1
Expression
Biased expression in fat (RPKM 8.3), placenta (RPKM 3.5) and 2 other tissues See more
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Genomic context

See LINC02587 in Genome Data Viewer
Location:
7p21.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (15688378..15696892)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (15821640..15830154)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (15728003..15736517)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene alkylglycerol monooxygenase Neighboring gene uncharacterized LOC124901591 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:15638304-15638834 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:15638835-15639363 Neighboring gene uncharacterized LOC105375166 Neighboring gene mesenchyme homeobox 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:15724672-15725504 Neighboring gene uncharacterized LOC101927558 Neighboring gene ribosomal protein L36a pseudogene 26

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110094.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005550, AI263603, DA829065
    Related
    ENST00000442176.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    15688378..15696892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    15821640..15830154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)