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LOC101927042 uncharacterized LOC101927042 [ Homo sapiens (human) ]

Gene ID: 101927042, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101927042
Gene description
uncharacterized LOC101927042
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Annotation category: only annotated on patches unit in reference assembly
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101927042 in Genome Data Viewer
Location:
9p13.1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 (PATCHES) NW_025791789.1 (338252..387120, complement)

NW_025791789.1Genomic Context describing neighboring genes Neighboring gene contactin associated protein family member 3 Neighboring gene splicing factor 45-like Neighboring gene MPRA-validated peak7241 silencer Neighboring gene MPRA-validated peak7240 silencer Neighboring gene vomeronasal 2 receptor 3, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:40134136-40134683 Neighboring gene uncharacterized LOC124905604 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:38767852-38769051

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025791789.1 Chromosome 9 Reference GRCh38.p14 PATCHES

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791789.1 Reference GRCh38.p14 PATCHES

    Range
    338252..387120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_242551.5 RNA Sequence

  2. XR_929610.3 RNA Sequence

  3. XR_242550.5 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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