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LOC101886384 CUB and zona pellucida-like domain-containing protein 1 [ Danio rerio (zebrafish) ]

Gene ID: 101886384, updated on 12-Sep-2024

Summary

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Gene symbol
LOC101886384
Gene description
CUB and zona pellucida-like domain-containing protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC101886384 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (21858832..21866817, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (21838996..21846527, complement)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene interferon induced protein 44e Neighboring gene CUB and zona pellucida-like domains 1, tandem duplicate 2 Neighboring gene CUB and zona pellucida-like domain-containing protein 1 Neighboring gene CUB and zona pellucida-like domains 1, tandem duplicate 1 Neighboring gene pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
CUB and zona pellucida-like domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    21858832..21866817 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009293032.3 → XP_009291307.2  CUB and zona pellucida-like domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8M9PVC9
    Conserved Domains (2) summary
    smart00241
    Location:652 → 896
    ZP; Zona pellucida (ZP) domain
    cd00041
    Location:532 → 641
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394986.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    106366..114351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021473124.2 → XP_021328799.1  CUB and zona pellucida-like domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8M9PVC9
    Conserved Domains (2) summary
    smart00241
    Location:652 → 896
    ZP; Zona pellucida (ZP) domain
    cd00041
    Location:532 → 641
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Nucleotide Protein Strain
Heading Accession and Version

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