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ATP6V1E1 ATPase H+ transporting V1 subunit E1 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101822037, updated on 3-Aug-2024

Summary

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Gene symbol
ATP6V1E1
Gene description
ATPase H+ transporting V1 subunit E1
See related
Ensembl:ENSFALG00000009645
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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See ATP6V1E1 in Genome Data Viewer
Location:
chromosome: 1A
Exon count:
9
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 1A NC_021672.1 (72649252..72660443)

Chromosome 1A - NC_021672.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101819465 Neighboring gene BCL2 like 13 Neighboring gene BH3 interacting domain death agonist Neighboring gene uncharacterized LOC107604607 Neighboring gene protein tyrosine phosphatase receptor type O

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021672.1 Chromosome 1A Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting two-sector ATPase complex, catalytic domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit E 1
Names
ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021672.1 Reference FicAlb1.5 Primary Assembly

    Range
    72649252..72660443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005040384.2 → XP_005040441.1  V-type proton ATPase subunit E 1

    See identical proteins and their annotated locations for XP_005040441.1

    UniProtKB/TrEMBL
    A0A803V0H7, U3K4W7
    Related
    ENSFALP00000016233.1, ENSFALT00000044334.1
    Conserved Domains (1) summary
    pfam01991
    Location:18 → 216
    vATP-synt_E; ATP synthase (E/31 kDa) subunit
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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