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LOC101751678 trichohyalin-like [ Gallus gallus (chicken) ]

Gene ID: 101751678, updated on 3-Dec-2024

Summary

Symbol
LOC101751678provided by CGNC
Full Name
trichohyalin-likeprovided by CGNC
Primary source
CGNC:71097
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SCFN
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Genomic context

See LOC101751678 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (1279353..1291371, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (1280751..1292669, complement)

Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene nicastrin Neighboring gene coatomer protein complex subunit alpha Neighboring gene S100 calcium binding protein A11 Neighboring gene uncharacterized LOC121107559 Neighboring gene keratin-associated protein 10-4-like Neighboring gene cornulin

Genomic regions, transcripts, and products

General protein information

Preferred Names
trichohyalin
Names
scaffoldin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001351495.3NP_001338424.3  trichohyalin

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000349
    UniProtKB/TrEMBL
    A0A8V1AA76
    Conserved Domains (4) summary
    PTZ00121
    Location:3651062
    PTZ00121; MAEBL; Provisional
    PRK10811
    Location:15611955
    rne; ribonuclease E; Reviewed
    PRK12678
    Location:15161675
    PRK12678; transcription termination factor Rho; Provisional
    cd00213
    Location:586
    S-100; S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1279353..1291371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046903885.1XP_046759841.1  trichohyalin isoform X15

    UniProtKB/TrEMBL
    A0A8V1AA76
  2. XM_046903872.1XP_046759828.1  trichohyalin isoform X2

    UniProtKB/TrEMBL
    A0A8V1AA76
  3. XM_046903880.1XP_046759836.1  trichohyalin isoform X10

    UniProtKB/TrEMBL
    A0A8V1AA76
  4. XM_046903882.1XP_046759838.1  trichohyalin isoform X12

    UniProtKB/TrEMBL
    A0A8V1AA76
  5. XM_046903875.1XP_046759831.1  trichohyalin isoform X5

    UniProtKB/TrEMBL
    A0A8V1AA76
  6. XM_046903889.1XP_046759845.1  trichohyalin isoform X19

    UniProtKB/TrEMBL
    A0A8V1AFL2
  7. XM_046903888.1XP_046759844.1  trichohyalin isoform X18

    UniProtKB/TrEMBL
    A0A8V1AFL2
  8. XM_046903886.1XP_046759842.1  trichohyalin isoform X16

    UniProtKB/TrEMBL
    A0A8V1AFL2
  9. XM_046903884.1XP_046759840.1  trichohyalin isoform X14

    UniProtKB/TrEMBL
    A0A8V1AA76
  10. XM_046903883.1XP_046759839.1  trichohyalin isoform X13

    UniProtKB/TrEMBL
    A0A8V1AA76
  11. XM_046903876.1XP_046759832.1  trichohyalin isoform X6

    UniProtKB/TrEMBL
    A0A8V1AA76
  12. XM_046903890.1XP_046759846.1  trichohyalin isoform X20

    UniProtKB/TrEMBL
    A0A8V1AFL2
  13. XM_046903887.1XP_046759843.1  trichohyalin isoform X17

    UniProtKB/TrEMBL
    A0A8V1AFL2
  14. XM_046903879.1XP_046759835.1  trichohyalin isoform X9

    UniProtKB/TrEMBL
    A0A8V1AA76
  15. XM_046903881.1XP_046759837.1  trichohyalin isoform X11

    UniProtKB/TrEMBL
    A0A8V1AA76
  16. XM_046903878.1XP_046759834.1  trichohyalin isoform X8

    UniProtKB/TrEMBL
    A0A8V1AA76
  17. XM_046903874.1XP_046759830.1  trichohyalin isoform X4

    UniProtKB/TrEMBL
    A0A8V1AA76
  18. XM_046903877.1XP_046759833.1  trichohyalin isoform X7

    UniProtKB/TrEMBL
    A0A8V1AA76
  19. XM_046903873.1XP_046759829.1  trichohyalin isoform X3

    UniProtKB/TrEMBL
    A0A8V1AA76
  20. XM_046903871.1XP_046759827.1  trichohyalin isoform X1

    UniProtKB/TrEMBL
    A0A8V1AA76

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1280751..1292669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)