U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCNN1D sodium channel epithelial 1 subunit delta [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100970727, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
SCNN1D
Gene description
sodium channel epithelial 1 subunit delta
See related
Ensembl:ENSPPAG00000039962
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SCNN1D in Genome Data Viewer
Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (226935345..226952596, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (225632019..225649369, complement)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 11 Neighboring gene pseudouridine synthase like 1 Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 Neighboring gene ubiquitin conjugating enzyme E2 J2 Neighboring gene C1q and TNF related 12

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ligand-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sodium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
amiloride-sensitive sodium channel subunit delta
Names
sodium channel epithelial 1 delta subunit
sodium channel, non-voltage-gated 1, delta subunit

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    226935345..226952596 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063602478.1 → XP_063458548.1  amiloride-sensitive sodium channel subunit delta isoform X1

    UniProtKB/TrEMBL
    A0A2R9C6V6

  2. XM_063602479.1 → XP_063458549.1  amiloride-sensitive sodium channel subunit delta isoform X2

    UniProtKB/TrEMBL
    A0A2R9C6V6

  3. XM_034952927.3 → XP_034808818.3  amiloride-sensitive sodium channel subunit delta isoform X1

    UniProtKB/TrEMBL
    A0A2R9C6V6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.