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LOC100912622 uncharacterized LOC100912622 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100912622, discontinued on 26-Mar-2024
  • This record was withdrawn by the Rat Genome Database (RGD).

Summary

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Symbol
LOC100912622provided by RGD
Full Name
uncharacterized LOC100912622provided by RGD
Primary source
RGD:6486070
Gene type
ncRNA
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record was withdrawn by the Rat Genome Database (RGD).
Expression
Biased expression in Heart (RPKM 45.7), Thymus (RPKM 44.9) and 9 other tissues See more
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Genomic context

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See LOC100912622 in Genome Data Viewer
Location:
2q43
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 latest, but not current mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (223858081..223868546, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (240620381..240626472, complement)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227675.2-RS_2023_06 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051337.1 Reference mRatBN7.2 Primary Assembly

    Range
    223858081..223868546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005501321.1 RNA Sequence

Gene LinkOut

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