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LOC100911506 uncharacterized LOC100911506 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100911506, updated on 17-Aug-2024

Summary

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Symbol
LOC100911506provided by RGD
Full Name
uncharacterized LOC100911506provided by RGD
Primary source
RGD:6492244
See related
AllianceGenome:RGD:6492244
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Kidney (RPKM 51.8), Adrenal (RPKM 20.2) and 9 other tissues See more
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Genomic context

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See LOC100911506 in Genome Data Viewer
Location:
14p11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (44668984..44672206, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (44315397..44318610, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (45978999..45982123, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA17 Neighboring gene serine/threonine/tyrosine interacting protein, pseudogene 2 Neighboring gene RELT-like 1 Neighboring gene similar to human chromosome 4 open reading frame 19 Neighboring gene NACHT and WD repeat domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    44668984..44672206 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_146284.6 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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