LOC100911093 CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: LOC100911093provided by RGD
Full Name: CCA tRNA nucleotidyltransferase 1, mitochondrial-likeprovided by RGD
Primary source: RGD:6494996
See related: EnsemblRapid:ENSRNOG00000020477 AllianceGenome:RGD:6494996
Gene type: protein coding
RefSeq status: MODEL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: AABR07005533.1
Summary: Predicted to enable RNA binding activity; nucleotide binding activity; and nucleotidyltransferase activity. Predicted to be involved in tRNA 3'-terminal CCA addition. [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Heart (RPKM 178.5), Thymus (RPKM 162.6) and 9 other tissues See more
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Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (180154702..180157040, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (170720730..170722745, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (185171373..185173658)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info
enables nucleotidyltransferase activity	IEA Inferred from Electronic Annotation more info
enables tRNA binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in mitochondrial tRNA 3'-end processing	IBA Inferred from Biological aspect of Ancestor more info
involved_in tRNA 3'-terminal CCA addition	IBA Inferred from Biological aspect of Ancestor more info
involved_in tRNA 3'-terminal CCA addition	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info

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The following sections contain reference sequences that belong to a specific genome build. Explain