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Rpl12-ps2 ribosomal protein L12, pseudogene 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100909433, updated on 4-Jan-2025

Summary

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Official Symbol
Rpl12-ps2provided by RGD
Official Full Name
ribosomal protein L12, pseudogene 2provided by RGD
Primary source
RGD:6503572
See related
AllianceGenome:RGD:6503572
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable large ribosomal subunit rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytoplasm and ribosome. Predicted to be part of cytosolic large ribosomal subunit. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Rpl12-ps2 in Genome Data Viewer
Location:
2q26
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (143934401..144786878, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (141784371..141785085, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (147710501..147711217, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene transmembrane 4 L six family member 4 Neighboring gene WW domain containing transcription regulator 1 Neighboring gene uncharacterized LOC108350015 Neighboring gene ribosomal protein L36A, pseudogene 1 Neighboring gene COMM domain containing 2 Neighboring gene ankyrin repeat and ubiquitin domain containing 1 Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene transfer RNA proline (anticodon AGG) 40 Neighboring gene ring finger protein 13 Neighboring gene uncharacterized LOC120100826 Neighboring gene non-POU domain containing, octamer-binding, pseudogene 2 Neighboring gene uncharacterized LOC120100828 Neighboring gene profilin 2 Neighboring gene uncharacterized LOC120100827 Neighboring gene lysine methyltransferase 5A like 1 Neighboring gene U2 spliceosomal RNA Neighboring gene ribosomal protein S13, pseudogene 8 Neighboring gene TSC22 domain family, member 2 Neighboring gene stress-associated endoplasmic reticulum protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables large ribosomal subunit rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
large ribosomal subunit protein uL11-like
Names
60S ribosomal protein L12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    143934401..144786878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063282709.1 → XP_063138779.1  large ribosomal subunit protein uL11-like

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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