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MAGI2-AS2 MAGI2 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 100874021, updated on 10-Dec-2024

Summary

Official Symbol
MAGI2-AS2provided by HGNC
Official Full Name
MAGI2 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:40861
See related
Ensembl:ENSG00000226978 AllianceGenome:HGNC:40861
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See MAGI2-AS2 in Genome Data Viewer
Location:
7q21.11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (79008988..79012277)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (80260905..80264210)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (78638304..78641593)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 2 Neighboring gene uncharacterized LOC124901683 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:78094936-78095436 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:78095437-78095937 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:78127410-78127910 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:78127911-78128411 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:78152989-78153548 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:78192436-78193031 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:78206961-78207460 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:78207790-78208526 Neighboring gene UFC1 pseudogene 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:78416757-78417956 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:78598351-78598852 Neighboring gene RNA, U6 small nuclear 337, pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

General gene information

Other Names

  • MAGI2 antisense RNA 2 (non-protein coding)

Clone Names

  • AC006324.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046689.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC006324
    Related
    ENST00000411616.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    79008988..79012277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    80260905..80264210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)