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SNX3P1Y sorting nexin 3 pseudogene 1 Y-linked [ Homo sapiens (human) ]

Gene ID: 100873885, updated on 17-Sep-2024

Summary

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Official Symbol
SNX3P1Yprovided by HGNC
Official Full Name
sorting nexin 3 pseudogene 1 Y-linkedprovided by HGNC
Primary source
HGNC:HGNC:41517
See related
Ensembl:ENSG00000278585 AllianceGenome:HGNC:41517
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See SNX3P1Y in Genome Data Viewer
Location:
Yp11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (5634484..5634655, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (5314500..5314671, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (5502525..5502696, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene protocadherin 11 Y-linked Neighboring gene eukaryotic translation initiation factor 4A1 pseudogene 2 Neighboring gene keratin 18 pseudogene 10 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:5577568-5578528 Neighboring gene ribosomal protein L26 pseudogene 37 Neighboring gene TUSC2 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032373.1 

    Range
    101..272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    5634484..5634655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    5314500..5314671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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