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LOC100845674 dormancy-associated protein 1 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100845674, updated on 6-Apr-2023

Summary

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Gene symbol
LOC100845674
Gene description
dormancy-associated protein 1
Locus tag
BRADI_2g55940v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100845674 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (54203292..54204728, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (54457707..54459133, complement)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104583354 Neighboring gene serine/threonine-protein kinase Nek5 Neighboring gene uricase Neighboring gene putative UDP-rhamnose:rhamnosyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. Mochida K, et al. PLoS One, 2013. PMID 24130698, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
dormancy-associated protein 1
Names
auxin-repressed 12.5 kDa protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    54203292..54204728 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003564632.4 → XP_003564680.1  dormancy-associated protein 1

    UniProtKB/TrEMBL
    I1HTP9
    Conserved Domains (1) summary
    pfam05564
    Location:5 → 111
    Auxin_repressed; Dormancy/auxin associated protein
Nucleotide Protein Strain
Heading Accession and Version

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