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LOC100832939 glycerol-3-phosphate 2-O-acyltransferase 6 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100832939, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100832939
Gene description
glycerol-3-phosphate 2-O-acyltransferase 6
Locus tag
BRADI_2g55290v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100832939 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (53722984..53726318, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (53977362..53980651, complement)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene WUSCHEL-related homeobox 9 Neighboring gene cytochrome P450 86A1 Neighboring gene uncharacterized LOC100833559 Neighboring gene myb-like protein Q

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerol-3-phosphate 2-O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cutin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate 2-O-acyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    53722984..53726318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003564591.4 → XP_003564639.1  glycerol-3-phosphate 2-O-acyltransferase 6

    UniProtKB/TrEMBL
    I1HTH7
    Conserved Domains (3) summary
    cd06551
    Location:300 → 460
    LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis
    PLN02177
    Location:1 → 494
    PLN02177; glycerol-3-phosphate acyltransferase
    pfam12710
    Location:25 → 201
    HAD; haloacid dehalogenase-like hydrolase
Nucleotide Protein Strain
Heading Accession and Version

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