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LOC100828993 multiple organellar RNA editing factor 3, mitochondrial [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100828993, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100828993
Gene description
multiple organellar RNA editing factor 3, mitochondrial
Locus tag
BRADI_2g31140v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100828993 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (30715026..30720959, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (30970187..30976120, complement)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol:ceramide inositolphosphotransferase Neighboring gene uncharacterized LOC104582710 Neighboring gene reticulon-like protein B1 Neighboring gene uncharacterized LOC104583199 Neighboring gene uncharacterized LOC100843343 Neighboring gene protein FAR1-RELATED SEQUENCE 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. Mochida K, et al. PLoS One, 2013. PMID 24130698, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cytidine to uridine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial mRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multiple organellar RNA editing factor 3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    30715026..30720959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003568637.4 → XP_003568685.1  multiple organellar RNA editing factor 3, mitochondrial

    UniProtKB/TrEMBL
    I1HKM6
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases