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LOC100814694 leucine-rich repeat-containing protein ODA7 [ Glycine max (soybean) ]

Gene ID: 100814694, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100814694
Gene description
leucine-rich repeat-containing protein ODA7
Locus tag
GLYMA_12G186700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100814694 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 12 NC_038248.2 (36201970..36206026)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 12 NC_038248.1 (34736252..34740376)

Chromosome 12 - NC_038248.2Genomic Context describing neighboring genes Neighboring gene casparian strip membrane protein 5 Neighboring gene mRNA-decapping enzyme-like protein Neighboring gene F-box protein At2g27310 Neighboring gene uncharacterized LOC100500255

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein ODA7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038248.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    36201970..36206026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003540207.5 → XP_003540255.1  leucine-rich repeat-containing protein ODA7

    See identical proteins and their annotated locations for XP_003540255.1

    UniProtKB/TrEMBL
    K7LVS6
    Conserved Domains (2) summary
    sd00033
    Location:21 → 42
    LRR_RI; leucine-rich repeat [structural motif]
    NF033189
    Location:4 → 216
    internalin_A; class 1 internalin InlA
Nucleotide Protein
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