U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100803769 FIP1[V]-like protein [ Glycine max (soybean) ]

Gene ID: 100803769, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100803769
Gene description
FIP1[V]-like protein
Locus tag
GLYMA_09G097600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100803769 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (15156261..15165775, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (15778536..15788342, complement)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100806228 Neighboring gene leucine-rich repeat receptor-like protein kinase TDR Neighboring gene LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 Neighboring gene putative vesicle-associated membrane protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
FIP1[V]-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    15156261..15165775 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003535014.5 → XP_003535062.1  FIP1[V]-like protein isoform X2

    UniProtKB/TrEMBL
    I1L2C9
    Conserved Domains (1) summary
    pfam05182
    Location:344 → 386
    Fip1; Fip1 motif

  2. XM_006587084.4 → XP_006587147.1  FIP1[V]-like protein isoform X1

    UniProtKB/TrEMBL
    K7LCU5
    Conserved Domains (1) summary
    pfam05182
    Location:346 → 388
    Fip1; Fip1 motif

  3. XM_006587085.4 → XP_006587148.1  FIP1[V]-like protein isoform X3

    Conserved Domains (3) summary
    PRK12678
    Location:700 → 955
    PRK12678; transcription termination factor Rho; Provisional
    TIGR01622
    Location:907 → 1046
    SF-CC1; splicing factor, CC1-like family
    pfam05182
    Location:346 → 388
    Fip1; Fip1 motif
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.