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LOC100797186 probable LRR receptor-like serine/threonine-protein kinase At2g23950 [ Glycine max (soybean) ]

Gene ID: 100797186, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100797186
Gene description
probable LRR receptor-like serine/threonine-protein kinase At2g23950
Locus tag
GLYMA_02G207400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100797186 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 2 NC_016089.4 (41071992..41077709)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 2 NC_016089.3 (39241319..39246804)

Chromosome 2 - NC_016089.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121173288 Neighboring gene uncharacterized LOC102662955 Neighboring gene autophagy-related protein 18b Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable LRR receptor-like serine/threonine-protein kinase At2g23950; probable LRR receptor-like serine/threonine-protein kinase At4g30520

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016089.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    41071992..41077709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003518182.5 → XP_003518230.1  probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X1

    UniProtKB/TrEMBL
    A0A0R0KZ27, I1JGT5
    Conserved Domains (3) summary
    PLN00113
    Location:29 → 183
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:95 → 118
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:301 → 567
    PKc_like; Protein Kinases, catalytic domain

  2. XM_041007967.1 → XP_040863901.1  probable LRR receptor-like serine/threonine-protein kinase At4g30520 isoform X2

    UniProtKB/TrEMBL
    A0A0R0KZ27, A0A0R0L5U5
    Conserved Domains (3) summary
    PLN03150
    Location:29 → 216
    PLN03150; hypothetical protein; Provisional
    sd00033
    Location:95 → 118
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:277 → 543
    PKc_like; Protein Kinases, catalytic domain

RNA

  1. XR_005887784.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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