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LOC100790462 uncharacterized LOC100790462 [ Glycine max (soybean) ]

Gene ID: 100790462, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100790462
Gene description
uncharacterized LOC100790462
Locus tag
GLYMA_07G001600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100790462 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 7 NC_038243.2 (157621..163231)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 7 NC_038243.1 (157633..163267)

Chromosome 7 - NC_038243.2Genomic Context describing neighboring genes Neighboring gene U-box domain-containing protein 35 Neighboring gene pyrophosphate-energized membrane proton pump 2 Neighboring gene auxin-responsive protein SAUR21 Neighboring gene protein brittle-1, chloroplastic/amyloplastic-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC100790462

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038243.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    157621..163231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003529373.5 → XP_003529421.1  uncharacterized protein LOC100790462

    See identical proteins and their annotated locations for XP_003529421.1

    UniProtKB/TrEMBL
    I1KG23
    Conserved Domains (2) summary
    TIGR02917
    Location:187 → 383
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:198 → 226
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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