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Il1b interleukin 1 beta [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100775079, updated on 8-Mar-2024

Summary

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Gene symbol
Il1b
Gene description
interleukin 1 beta
Locus tag
I79_017162
See related
Ensembl:ENSCGRG00015014193
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Il1b in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614639.1 (581353..586560)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (49212803..49218012)

NW_003614639.1Genomic Context describing neighboring genes Neighboring gene signal-regulatory protein beta-1 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables interleukin-1 receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of immature T cell proliferation in thymus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of nitric-oxide synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-1 beta
Names
Interleukin-1 beta
interleukin-1 beta-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614639.1 Reference CriGri_1.0 Primary Assembly

    Range
    581353..586560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035460238.1 → XP_035316129.1  interleukin-1 beta

    UniProtKB/TrEMBL
    A0A3L7HES0, G3I1B0
    Conserved Domains (2) summary
    smart00125
    Location:118 → 263
    IL1; Interleukin-1 homologues
    pfam02394
    Location:1 → 101
    IL1_propep; Interleukin-1 propeptide

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    49212803..49218012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446351.1 → XP_035302242.1  interleukin-1 beta

    UniProtKB/TrEMBL
    A0A3L7HES0, G3I1B0
    Related
    ENSCGRP00015018446.1, ENSCGRT00015022688.2
    Conserved Domains (2) summary
    smart00125
    Location:118 → 263
    IL1; Interleukin-1 homologues
    pfam02394
    Location:1 → 101
    IL1_propep; Interleukin-1 propeptide
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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