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LOC100631258 isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma pseudogene [ Homo sapiens (human) ]

Gene ID: 100631258, updated on 17-Sep-2024

Summary

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Gene symbol
LOC100631258
Gene description
isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma pseudogene
See related
Ensembl:ENSG00000225477
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
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Genomic context

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See LOC100631258 in Genome Data Viewer
Location:
11p15.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (21283781..21284939)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (21404440..21405598)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (21305327..21306485)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene neural EGFL like 1 Neighboring gene RNA, 5S ribosomal pseudogene 336 Neighboring gene uncharacterized LOC124902809 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:21311115-21311614 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20242 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20249 Neighboring gene RNA, 5S ribosomal pseudogene 337 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20387 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20421 Neighboring gene uncharacterized LOC102723370 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20487 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20507 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_20562 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:21831599-21832798 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:21882755-21883281 Neighboring gene uncharacterized LOC105376587

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Homology

Other Names

  • isocitrate dehydrogenase (NAD(+)) 3 gamma pseudogene
  • isocitrate dehydrogenase 3 (NAD(+)) gamma pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029278.1 

    Range
    101..1259
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    21283781..21284939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    21404440..21405598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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