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Mir5107 microRNA 5107 [ Mus musculus (house mouse) ]

Gene ID: 100628611, updated on 17-Aug-2024

Summary

Official Symbol
Mir5107provided by MGI
Official Full Name
microRNA 5107provided by MGI
Primary source
MGI:MGI:4950427
See related
Ensembl:ENSMUSG00000093327 miRBase:MI0018016; AllianceGenome:MGI:4950427
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mir-5107; mu-mir-5107; mmu-mir-5107
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See Mir5107 in Genome Data Viewer
Location:
18 E1; 18 34.41 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (60945148..60945235)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (60812076..60812163)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr18:60935339-60935448 Neighboring gene ribosomal protein S14 Neighboring gene 40S ribosomal protein S16 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E2509 Neighboring gene STARR-positive B cell enhancer ABC_E1960 Neighboring gene STARR-positive B cell enhancer ABC_E2510 Neighboring gene STARR-positive B cell enhancer ABC_E8719 Neighboring gene CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) Neighboring gene treacle ribosome biogenesis factor 1 Neighboring gene STARR-seq mESC enhancer starr_44732 Neighboring gene STARR-positive B cell enhancer ABC_E3230 Neighboring gene predicted gene, 41744

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039567.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC139759
    Related
    ENSMUST00000175586.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    60945148..60945235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)