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Snord42a small nucleolar RNA, C/D box 42A [ Mus musculus (house mouse) ]

Gene ID: 100529076, updated on 17-Aug-2024

Summary

Official Symbol
Snord42aprovided by MGI
Official Full Name
small nucleolar RNA, C/D box 42Aprovided by MGI
Primary source
MGI:MGI:3819532
See related
AllianceGenome:MGI:3819532
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
U42A; MBII-292
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Genomic context

See Snord42a in Genome Data Viewer
Location:
11 46.74 cM; 11 B5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (78072128..78072172, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (78181302..78181346, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_30088 Neighboring gene NIMA (never in mitosis gene a)-related expressed kinase 8 Neighboring gene STARR-positive B cell enhancer ABC_E8429 Neighboring gene STARR-positive B cell enhancer ABC_E9831 Neighboring gene STARR-positive B cell enhancer ABC_E7023 Neighboring gene TLC domain containing 1 Neighboring gene microRNA 7653 Neighboring gene ribosomal protein L23A Neighboring gene small nucleolar RNA, C/D box 4A Neighboring gene small nucleolar RNA, C/D box 42B

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037682.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AF357366

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    78072128..78072172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)