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LOC100527468 uncharacterized LOC100527468 [ Glycine max (soybean) ]

Gene ID: 100527468, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100527468
Gene description
uncharacterized LOC100527468
Locus tag
GLYMA_02G291900v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100527468 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 2 NC_016089.4 (48941245..48943357)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 2 NC_016089.3 (47117102..47119214)

Chromosome 2 - NC_016089.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100796494 Neighboring gene uncharacterized LOC100797026 Neighboring gene uncharacterized LOC106796952 Neighboring gene DNA mismatch repair protein MSH5-like Neighboring gene uncharacterized LOC100798096

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC100527468

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001249547.2 → NP_001236476.1  uncharacterized protein LOC100527468

    See identical proteins and their annotated locations for NP_001236476.1

    Status: VALIDATED

    Source sequence(s)
    BI699562, BQ628211, BT092311
    UniProtKB/TrEMBL
    A0A0R0GJP9, C6T4F0
    Conserved Domains (1) summary
    pfam02330
    Location:56 → 198
    MAM33; Mitochondrial glycoprotein

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016089.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    48941245..48943357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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