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Cct6a-ps5 chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100499415, updated on 17-Aug-2024

Summary

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Official Symbol
Cct6a-ps5provided by RGD
Official Full Name
chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 5provided by RGD
Primary source
RGD:4109663
See related
AllianceGenome:RGD:4109663
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Cct6a-5p
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Genomic context

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See Cct6a-ps5 in Genome Data Viewer
Location:
18p11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (34291133..34293094, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (34040090..34042051, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (36364253..36366214, complement)

Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene PRELI domain containing 2 Neighboring gene cyclin-dependent kinase 1 pseudogene Neighboring gene glutaredoxin and cysteine rich domain containing 2 Neighboring gene Sec61 translocon subunit gamma, pseudogene 6 Neighboring gene SH3 domain containing ring finger 2 Neighboring gene uncharacterized LOC120098119

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. Mukherjee K, et al. BMC Evol Biol, 2010 Mar 1. PMID 20193073, Free PMC Article
  2. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, et al. Nature, 2004 Apr 1. PMID 15057822

GeneRIFs: Gene References Into Functions

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023520.1 

    Range
    101..2062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086036.1 Reference GRCr8

    Range
    34291133..34293094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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