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CWC27 CWC27 spliceosome associated cyclophilin [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 100430842, updated on 17-Aug-2024

Summary

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Official Symbol
CWC27provided by VGNC
Official Full Name
CWC27 spliceosome associated cyclophilinprovided by VGNC
Primary source
VGNC:VGNC:71396
See related
Ensembl:ENSMMUG00000015041
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CWC27 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (63300310..63563656)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (62952094..63177272)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene shisa like 2B Neighboring gene SREK1 interacting protein 1 Neighboring gene uncharacterized LOC114678802 Neighboring gene U4 spliceosomal RNA Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene uncharacterized LOC106998782

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein peptidyl-prolyl isomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spliceosome-associated protein CWC27 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    63300310..63563656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028849465.1 → XP_028705298.1  spliceosome-associated protein CWC27 homolog

    UniProtKB/TrEMBL
    A0A1D5Q415, H9FNL7, I0FNC3
    Related
    ENSMMUP00000042778.2, ENSMMUT00000054452.2
    Conserved Domains (3) summary
    COG4372
    Location:308 → 403
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    cd01925
    Location:8 → 178
    cyclophilin_CeCYP16-like; cyclophilin-type peptidylprolyl cis- trans isomerase) (PPIase) domain similar to Caenorhabditis elegans cyclophilin 16. C. elegans CeCYP-16, compared to the archetypal cyclophilin Human cyclophilin A has, a reduced peptidylprolyl cis- trans isomerase ...
    cd22288
    Location:377 → 429
    CWC27_CTD; C-terminal domain of spliceosome-associated protein CWC27 and similar proteins
Nucleotide Protein
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