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RBM6 RNA binding motif protein 6 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 100430829, updated on 17-Aug-2024

Summary

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Official Symbol
RBM6provided by VGNC
Official Full Name
RNA binding motif protein 6provided by VGNC
Primary source
VGNC:VGNC:76683
Locus tag
EGK_11618
See related
Ensembl:ENSMMUG00000003494
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RBM6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (106068589..106193187)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (92253373..92378798, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106996917 Neighboring gene macrophage stimulating 1 receptor Neighboring gene MON1 homolog A, secretory trafficking associated Neighboring gene RNA binding motif protein 5 Neighboring gene semaphorin 3F Neighboring gene uncharacterized LOC114676350 Neighboring gene uncharacterized LOC114676351

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    106068589..106193187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015130879.2 → XP_014986365.1  RNA-binding protein 6 isoform X5

    Conserved Domains (4) summary
    cd12563
    Location:132 → 218
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    cd16074
    Location:250 → 257
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:244 → 302
    OCRE; OCRE domain
    pfam01585
    Location:529 → 574
    G-patch; G-patch domain

  2. XM_015130873.2 → XP_014986359.1  RNA-binding protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q5W9, A0A5S6R951, A0A8J8YP32, F7E7A7, G7ML78
    Related
    ENSMMUP00000043435.2, ENSMMUT00000062871.2
    Conserved Domains (6) summary
    COG1357
    Location:92 → 237
    YjbI; Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]
    cd12314
    Location:456 → 533
    RRM1_RBM6; RNA recognition motif 1 in vertebrate RNA-binding protein 6 (RBM6)
    cd12563
    Location:654 → 740
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    pfam01585
    Location:1051 → 1096
    G-patch; G-patch domain
    cd16074
    Location:772 → 779
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:766 → 824
    OCRE; OCRE domain

  3. XM_028844137.1 → XP_028699970.1  RNA-binding protein 6 isoform X5

    Conserved Domains (4) summary
    cd12563
    Location:132 → 218
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    cd16074
    Location:250 → 257
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:244 → 302
    OCRE; OCRE domain
    pfam01585
    Location:529 → 574
    G-patch; G-patch domain

  4. XM_015130876.2 → XP_014986362.1  RNA-binding protein 6 isoform X3

    UniProtKB/TrEMBL
    A0A1D5Q5W9
    Conserved Domains (6) summary
    COG1357
    Location:11 → 127
    YjbI; Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]
    cd12314
    Location:324 → 401
    RRM1_RBM6; RNA recognition motif 1 in vertebrate RNA-binding protein 6 (RBM6)
    cd12563
    Location:522 → 608
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    pfam01585
    Location:919 → 964
    G-patch; G-patch domain
    cd16074
    Location:640 → 647
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:634 → 692
    OCRE; OCRE domain

  5. XM_028844136.1 → XP_028699969.1  RNA-binding protein 6 isoform X5

    Conserved Domains (4) summary
    cd12563
    Location:132 → 218
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    cd16074
    Location:250 → 257
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:244 → 302
    OCRE; OCRE domain
    pfam01585
    Location:529 → 574
    G-patch; G-patch domain

  6. XM_028844138.1 → XP_028699971.1  RNA-binding protein 6 isoform X5

    Conserved Domains (4) summary
    cd12563
    Location:132 → 218
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    cd16074
    Location:250 → 257
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:244 → 302
    OCRE; OCRE domain
    pfam01585
    Location:529 → 574
    G-patch; G-patch domain

  7. XM_015130871.2 → XP_014986357.1  RNA-binding protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q5W9, A0A5S6R951, A0A8J8YP32, F7E7A7, G7ML78
    Related
    ENSMMUP00000004658.4, ENSMMUT00000004945.4
    Conserved Domains (6) summary
    COG1357
    Location:92 → 237
    YjbI; Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]
    cd12314
    Location:456 → 533
    RRM1_RBM6; RNA recognition motif 1 in vertebrate RNA-binding protein 6 (RBM6)
    cd12563
    Location:654 → 740
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    pfam01585
    Location:1051 → 1096
    G-patch; G-patch domain
    cd16074
    Location:772 → 779
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:766 → 824
    OCRE; OCRE domain

  8. XM_015130872.2 → XP_014986358.1  RNA-binding protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q5W9, A0A5S6R951, A0A8J8YP32, F7E7A7, G7ML78
    Conserved Domains (6) summary
    COG1357
    Location:92 → 237
    YjbI; Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]
    cd12314
    Location:456 → 533
    RRM1_RBM6; RNA recognition motif 1 in vertebrate RNA-binding protein 6 (RBM6)
    cd12563
    Location:654 → 740
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    pfam01585
    Location:1051 → 1096
    G-patch; G-patch domain
    cd16074
    Location:772 → 779
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:766 → 824
    OCRE; OCRE domain

  9. XM_028844135.1 → XP_028699968.1  RNA-binding protein 6 isoform X4

    Conserved Domains (5) summary
    COG1357
    Location:92 → 237
    YjbI; Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]
    cd12314
    Location:456 → 533
    RRM1_RBM6; RNA recognition motif 1 in vertebrate RNA-binding protein 6 (RBM6)
    cd12563
    Location:654 → 740
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    cd16074
    Location:772 → 779
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:766 → 824
    OCRE; OCRE domain

  10. XM_015130875.2 → XP_014986361.1  RNA-binding protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A1D5Q5W9, H9Z440
    Conserved Domains (6) summary
    COG1357
    Location:92 → 237
    YjbI; Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]
    cd12314
    Location:456 → 533
    RRM1_RBM6; RNA recognition motif 1 in vertebrate RNA-binding protein 6 (RBM6)
    cd12563
    Location:652 → 738
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    pfam01585
    Location:1049 → 1094
    G-patch; G-patch domain
    cd16074
    Location:770 → 777
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:764 → 822
    OCRE; OCRE domain

  11. XM_028844139.1 → XP_028699972.1  RNA-binding protein 6 isoform X5

    Conserved Domains (4) summary
    cd12563
    Location:132 → 218
    RRM2_RBM6; RNA recognition motif 2 in vertebrate RNA-binding protein 6 (RBM6)
    cd16074
    Location:250 → 257
    OCRE; OCRE repeat 1 [structural motif]
    cl23757
    Location:244 → 302
    OCRE; OCRE domain
    pfam01585
    Location:529 → 574
    G-patch; G-patch domain
Nucleotide Protein
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