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GAPDHP52 glyceraldehyde 3 phosphate dehydrogenase pseudogene 52 [ Homo sapiens (human) ]

Gene ID: 100421313, updated on 10-Dec-2024

Summary

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Official Symbol
GAPDHP52provided by HGNC
Official Full Name
glyceraldehyde 3 phosphate dehydrogenase pseudogene 52provided by HGNC
Primary source
HGNC:HGNC:38558
See related
Ensembl:ENSG00000235076 AllianceGenome:HGNC:38558
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See GAPDHP52 in Genome Data Viewer
Location:
13q12.11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (21358376..21359311)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (20552706..20553641)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (21932515..21933450)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370105 Neighboring gene coiled-coil domain-containing protein 144B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7434 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7435 Neighboring gene long intergenic non-protein coding RNA 539 Neighboring gene mitochondrial intermediate peptidase pseudogene 3 Neighboring gene G protein-coupled receptor kinase 6 pseudogene 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:21911141-21911723 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:21912641-21913197 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:21916347-21916850 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:21920736-21920939 Neighboring gene nitric oxide synthase-like Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:21951083-21951599 Neighboring gene RNA, 5S ribosomal pseudogene 25 Neighboring gene zinc finger DHHC-type palmitoyltransferase 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_024895.1 

    Range
    101..1036
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    21358376..21359311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    20552706..20553641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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