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Hspa8-ps14 heat shock protein family A (Hsp70) member 8, pseudogene 14 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100363133, updated on 17-Aug-2024

Summary

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Official Symbol
Hspa8-ps14provided by RGD
Official Full Name
heat shock protein family A (Hsp70) member 8, pseudogene 14provided by RGD
Primary source
RGD:2324757
See related
EnsemblRapid:ENSRNOG00000032585 AllianceGenome:RGD:2324757
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Annotation information
Note: The functional gene for Hspa8 is located on Rno8. It was incorrectly placed on Rno5 on the reference assembly for NCBI Build 4.1 at the location of this pseudogene. The correct GeneID for the functional gene is geneID:24468. [17 Jun 2014]
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Genomic context

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See Hspa8-ps14 in Genome Data Viewer
Location:
5q36
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (161218088..161220200, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (155934803..155936915, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (99030998..99033110, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene PRAME family member 5 Neighboring gene oogenesin 2 like, pseudogene 1 Neighboring gene Kruppel like factor 4, pseudogene 1 Neighboring gene oogenesin 3 Neighboring gene oogenesin 1, pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • heat shock cognate 71 kDa protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029209.3 

    Range
    101..2213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    161218088..161220200 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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