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Tmem221 transmembrane protein 221 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100361931, updated on 2-Nov-2024

Summary

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Official Symbol
Tmem221provided by RGD
Official Full Name
transmembrane protein 221provided by RGD
Primary source
RGD:2319149
See related
EnsemblRapid:ENSRNOG00000018167 AllianceGenome:RGD:2319149
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human TMEM221 (transmembrane protein 221). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 3.6), Testes (RPKM 2.3) and 5 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Tmem221 in Genome Data Viewer
Location:
16p14
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (18296036..18305077, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (18253622..18271094, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (19984368..19992507, complement)

Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase like 1 Neighboring gene multivesicular body subunit 12A Neighboring gene nucleoredoxin-like 1 Neighboring gene solute carrier family 27 member 1 Neighboring gene 6-phosphogluconolactonase Neighboring gene niban apoptosis regulator 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transmembrane protein 221
Names
rCG38870-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086034.1 Reference GRCr8

    Range
    18296036..18305077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039094898.2 → XP_038950826.1  transmembrane protein 221 isoform X2

    Related
    ENSRNOP00000100124.1, ENSRNOT00000166744.1
    Conserved Domains (1) summary
    pfam15038
    Location:94 → 186
    Jiraiya

  2. XM_063275927.1 → XP_063131997.1  transmembrane protein 221 isoform X2

  3. XM_063275925.1 → XP_063131995.1  transmembrane protein 221 isoform X1

  4. XM_063275926.1 → XP_063131996.1  transmembrane protein 221 isoform X3

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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