U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Lce3b late cornified envelope 3B [ Rattus norvegicus (Norway rat) ]

Gene ID: 100361859, updated on 27-Nov-2024

Summary

Official Symbol
Lce3bprovided by RGD
Official Full Name
late cornified envelope 3Bprovided by RGD
Primary source
RGD:2319318
See related
EnsemblRapid:ENSRNOG00000076446 AllianceGenome:RGD:2319318
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Lce3c; Lce3d
Summary
Predicted to be involved in keratinization. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward (RPKM 40.7) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Lce3b in Genome Data Viewer
Location:
2q34
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (181245939..181247060)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (178550333..178551454)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (193248807..193249881)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene serine hydroxymethyltransferase 2, pseudogene 1 Neighboring gene late cornified envelope protein 3B-like Neighboring gene U6 spliceosomal RNA Neighboring gene late cornified envelope 3E like 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
late cornified envelope 3D
Names
late cornified envelope 3C
late cornified envelope protein 3D-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001402584.1NP_001389513.1  late cornified envelope 3D

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002
    UniProtKB/TrEMBL
    A0A8I6AH24
    Related
    ENSRNOP00000099875.1, ENSRNOT00000123161.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    181245939..181247060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)