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Rps15al4 ribosomal protein S15A-like 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100361715, updated on 4-Jan-2025

Summary

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Symbol
Rps15al4provided by RGD
Full Name
ribosomal protein S15A-like 4provided by RGD
Primary source
RGD:2319559
See related
EnsemblRapid:ENSRNOG00000052207 AllianceGenome:RGD:2319559
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Rps15a-ps7
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in nucleolus. Predicted to be part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 20. Orthologous to human RPS15A (ribosomal protein S15a). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Rps15al4 in Genome Data Viewer
Location:
2q16
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (56165004..56165500, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (54437544..54438039, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (55055274..55055761, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120100730 Neighboring gene prostaglandin E receptor 4 Neighboring gene uncharacterized LOC103691475 Neighboring gene uncharacterized LOC120100731 Neighboring gene ETS variant transcription factor 5, pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein S15A-like 4; small ribosomal subunit protein uS8
Names
40S ribosomal protein S15a
40S ribosomal protein S15a-like
hCG1994130-like
ribosomal protein S15A, pseudogene 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    56165004..56165500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039103526.2 → XP_038959454.1  small ribosomal subunit protein uS8

    UniProtKB/TrEMBL
    A0A0G2JYA6, D3ZLL8, D4A8P1
    Related
    ENSRNOP00000042242.2, ENSRNOT00000041483.5
    Conserved Domains (1) summary
    PTZ00158
    Location:1 → 130
    PTZ00158; 40S ribosomal protein S15A; Provisional
Nucleotide Protein Strain
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Gene LinkOut

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Molecular Biology Databases
Research Materials