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Rpl36l5 ribosomal protein L36 like 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100360439, updated on 14-Nov-2024

Summary

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Official Symbol
Rpl36l5provided by RGD
Official Full Name
ribosomal protein L36 like 5provided by RGD
Primary source
RGD:2322117
See related
EnsemblRapid:ENSRNOG00000029560 AllianceGenome:RGD:2322117
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human RPL36 (ribosomal protein L36). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Rpl36l5 in Genome Data Viewer
Location:
12p11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (16521961..16522378, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (11408379..11408767, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (13461683..13462053, complement)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102555525 Neighboring gene RB-associated KRAB zinc finger Neighboring gene ring finger protein 216 Neighboring gene uncharacterized LOC120095834 Neighboring gene uncharacterized LOC120095835 Neighboring gene fascin actin-bundling protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
large ribosomal subunit protein eL36-like
Names
60S ribosomal protein L36-like
ribosomal protein L36-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    16521961..16522378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039089857.2 → XP_038945785.1  large ribosomal subunit protein eL36-like

    UniProtKB/TrEMBL
    A0A0G2K6X1, F1M706
    Related
    ENSRNOP00000045195.1, ENSRNOT00000043110.5
    Conserved Domains (1) summary
    pfam01158
    Location:4 → 94
    Ribosomal_L36e; Ribosomal protein L36e
Nucleotide Protein Strain
Heading Accession and Version

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